Saturday, March 28, 2015

010-2011

MO640 - Multiple-choice question


Consider the following sequences:  s = AACT  and  t = GAGG . If we apply the basic global alignment algorithm on these sequences, with weights match = 1, mismatch = -1 and gap = -2, where s occupies the first column and t the first row, what are the values of the last row and the last column of the matrix?


a. Row: -8,-7,-3,-2,-1 ; Column: -8,-5,-4,-3,-2
b. Row: -8,-7,-3,-2,-1 ; Column: -8,-5,-3,-2,-1
c. Row: -8,-7,-4,-3,-2 ; Column: -8,-5,-4,-3,-2
d. Row: -8,-7,-4,-3,-1 ; Column: -8,-5,-3,-2,-1
e. None of the above
 
Original idea by: Wilson Vendramel
Translation help by: Shagalí Huanca Vargas

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